STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZNF1_BRAFLUncharacterized protein. (52 aa)    
Predicted Functional Partners:
C3YR16_BRAFL
Ig-like domain-containing protein.
  
   
 0.536
C3Y559_BRAFL
ETS domain-containing protein.
  
     0.517
C3Z0C7_BRAFL
Ig-like domain-containing protein.
  
 
   0.517
C3Z120_BRAFL
BHLH domain-containing protein.
  
     0.517
C3XRV2_BRAFL
Nuclear receptor domain-containing protein.
  
     0.515
C3YIH3_BRAFL
Paired domain-containing protein.
  
     0.515
C3ZMA9_BRAFL
Uncharacterized protein.
  
     0.513
C3ZQ47_BRAFL
Nuclear receptor domain-containing protein.
  
     0.509
C3Z0E0_BRAFL
Ig-like domain-containing protein.
  
     0.507
C3ZF86_BRAFL
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.505
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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