STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZT12_BRAFLEGF-like domain-containing protein. (343 aa)    
Predicted Functional Partners:
C3ZNM8_BRAFL
Uncharacterized protein.
 
   
  0.900
C3ZRQ3_BRAFL
Uncharacterized protein.
 
   
  0.866
C3Y7M4_BRAFL
Uncharacterized protein.
 
      0.858
C3Z6G2_BRAFL
Uncharacterized protein.
 
   
  0.851
C3ZNN3_BRAFL
Uncharacterized protein.
 
   
  0.849
C3Y2I9_BRAFL
Uncharacterized protein.
 
   
  0.825
C3YJV5_BRAFL
Uncharacterized protein.
 
   
  0.819
C3ZNN8_BRAFL
Uncharacterized protein.
 
   
  0.788
C3Z8C5_BRAFL
Uncharacterized protein.
 
      0.696
C3Y637_BRAFL
Uncharacterized protein.
 
   
  0.685
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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