STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZXE4_BRAFLUmuC domain-containing protein. (488 aa)    
Predicted Functional Partners:
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.957
C3Y6K1_BRAFL
Uncharacterized protein.
  
0.956
C3ZVR8_BRAFL
HORMA domain-containing protein.
   
 0.794
C3YI96_BRAFL
DNA polymerase.
   
 0.739
C3YI97_BRAFL
DNA_pol_B_exo1 domain-containing protein.
   
 0.739
C3ZM79_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.738
C3ZVP5_BRAFL
Uncharacterized protein.
   
 0.727
C3YVY6_BRAFL
RECA_2 domain-containing protein.
  
 0.696
C3Y2C9_BRAFL
Uncharacterized protein.
    
 0.684
C3YZR5_BRAFL
Uncharacterized protein.
    
 0.684
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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