STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4A0D5_BRAFLUncharacterized protein. (388 aa)    
Predicted Functional Partners:
C3YDJ4_BRAFL
RING-type domain-containing protein.
   
    0.644
C3Y4G5_BRAFL
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.577
C3ZAR1_BRAFL
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
  0.573
C3Y9B8_BRAFL
Uncharacterized protein.
   
 
  0.469
C3YLN9_BRAFL
Plug_translocon domain-containing protein.
 
 
  
 0.466
C3YN38_BRAFL
Uncharacterized protein.
      
 0.451
C3ZBW9_BRAFL
Uncharacterized protein.
      
 0.450
C3YH01_BRAFL
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 
  0.415
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (18%) [HD]