STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4A0H3_BRAFLCytochrome b5 heme-binding domain-containing protein. (115 aa)    
Predicted Functional Partners:
C3Y8I4_BRAFL
Cytochrome b5; Belongs to the cytochrome b5 family.
   
  
 0.580
C3XTR7_BRAFL
Cytochrome c oxidase subunit 6A, mitochondrial.
   
  
 0.533
C3YZA4_BRAFL
Uncharacterized protein.
      
 0.435
C3XX81_BRAFL
Uncharacterized protein.
      
 0.434
C3ZHE1_BRAFL
C2H2-type domain-containing protein.
      
 0.433
C3YF25_BRAFL
LisH domain-containing protein.
   
    0.400
C3YWZ5_BRAFL
LisH domain-containing protein.
   
    0.400
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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