STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4A114_BRAFLUncharacterized protein. (308 aa)    
Predicted Functional Partners:
C3YXK9_BRAFL
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.865
C3Y2R0_BRAFL
Uncharacterized protein.
  
 
 0.739
C3YJ03_BRAFL
Uncharacterized protein.
  
 
 0.736
C3YFF0_BRAFL
DHO_dh domain-containing protein.
  
 0.678
C3YCJ1_BRAFL
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
 0.665
C3YHI6_BRAFL
Uncharacterized protein.
  
 0.657
C3ZXV8_BRAFL
OMPdecase domain-containing protein.
  
 
 0.656
C3Z1V5_BRAFL
Uncharacterized protein.
  
  
 0.650
C3XV03_BRAFL
Uncharacterized protein.
  
 
 0.616
C3Z8K6_BRAFL
FAD-binding FR-type domain-containing protein.
  
 
 0.607
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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