STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmphiFoxDWinged helix/forkhead transcription factor. (402 aa)    
Predicted Functional Partners:
C3XY76_BRAFL
RFX-type winged-helix domain-containing protein.
    
 
 0.522
C3YDQ8_BRAFL
Mothers against decapentaplegic homolog.
    
 0.458
C3ZKE8_BRAFL
Paired box protein 6.
   
 
 0.444
C3ZE76_BRAFL
HMG box domain-containing protein.
   
 0.439
C3ZAG9_BRAFL
Uncharacterized protein.
      
 0.420
C3YKX2_BRAFL
Deacetylase sirtuin-type domain-containing protein.
    
 0.418
C3XPR5_BRAFL
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
  
 0.406
C3ZIC2_BRAFL
Fork-head domain-containing protein.
  
   
0.406
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.