STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R494_PETMACytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (146 aa)    
Predicted Functional Partners:
S4RHN5_PETMA
Sulfite oxidase; Belongs to the cytochrome b5 family.
   
 
0.915
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.887
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
   
 0.887
S4REH5_PETMA
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
    
 0.862
S4RM45_PETMA
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.861
S4RTF9_PETMA
Elongation of very long chain fatty acids protein.
   
 
 0.793
S4RLN0_PETMA
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.765
S4RW13_PETMA
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.761
ENSPMAP00000001833
annotation not available
     
 0.756
S4RR66_PETMA
Uncharacterized protein.
     
 0.750
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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