STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R495_PETMAWD_REPEATS_REGION domain-containing protein. (352 aa)    
Predicted Functional Partners:
S4RR09_PETMA
Uncharacterized protein.
     
 0.981
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
 0.980
S4RCH3_PETMA
NudE neurodevelopment protein 1.
    
 
 0.905
S4RRQ6_PETMA
Dynactin 2 (p50).
    
 0.852
S4RQ34_PETMA
Formimidoyltransferase cyclodeaminase.
   
 
  0.806
S4RDS9_PETMA
Phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma).
     
 0.804
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
     
 0.796
S4RGI3_PETMA
Indoleamine 2,3-dioxygenase 1.
   
 
  0.796
S4RP43_PETMA
Uncharacterized protein.
     
 0.795
S4RJM6_PETMA
Tyrosine aminotransferase.
   
 
  0.792
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.