STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R498_PETMAB30.2/SPRY domain-containing protein. (153 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.617
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.590
S4RF48_PETMA
Growth arrest-specific 7a.
    
  0.543
S4RR10_PETMA
Zinc finger, AN1-type domain 4.
    
 0.541
S4RLY9_PETMA
Uncharacterized protein.
   
 0.492
CRYGS-3
Crystallin gamma S; Belongs to the beta/gamma-crystallin family.
  
     0.485
S4RLZ6_PETMA
Uncharacterized protein.
    
 0.484
S4RI29_PETMA
Ubiquitin-conjugating enzyme E2T (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
  0.475
S4RYP1_PETMA
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.475
S4R953_PETMA
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.456
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.