Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R4A1_PETMAUncharacterized protein. (119 aa)    
Predicted Functional Partners:
S4R6K3_PETMA
Uncharacterized protein.
 
     0.929
S4R6J1_PETMA
Fibrinogen C-terminal domain-containing protein.
    
  0.702
S4RJW6_PETMA
Uncharacterized protein.
    
  0.702
S4RKF2_PETMA
Uncharacterized protein.
    
  0.702
S4RWN5_PETMA
Uncharacterized protein.
    
  0.702
S4RUF7_PETMA
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.667
S4RRN2_PETMA
Uncharacterized protein.
      
 0.613
S4R526_PETMA
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
    
   0.588
S4RQJ7_PETMA
ATPase H+ transporting V1 subunit H.
    
   0.588
S4RQK2_PETMA
Uncharacterized protein.
    
   0.588
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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