STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R4A2_PETMAUncharacterized protein. (181 aa)    
Predicted Functional Partners:
S4R5T6_PETMA
Uncharacterized protein.
 
     0.951
S4RYH1_PETMA
RAB11B, member RAS oncogene family, a.
    
 0.815
S4RIC7_PETMA
RAB11B, member RAS oncogene family, b.
    
 0.649
S4RPY4_PETMA
RAB, member of RAS oncogene family-like 2.
    
 0.649
EHD1
EH domain containing 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.601
S4RPZ0_PETMA
Uncharacterized protein.
     
 0.601
S4RZ09_PETMA
MYND-type domain-containing protein.
   
    0.474
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.