Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
S4R4B2_PETMAGrpE-like 1, mitochondrial; Belongs to the GrpE family. (230 aa)    
Predicted Functional Partners:
S4RPS8_PETMA
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.996
S4RBJ3_PETMA
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
  
 0.965
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.963
S4RNI6_PETMA
DnaJ heat shock protein family (Hsp40) member A3b.
  
 
 0.947
S4REL5_PETMA
Uncharacterized protein.
  
 0.930
S4R8Q7_PETMA
Translocase of inner mitochondrial membrane 23 homolog a (yeast).
   
 0.926
S4S027_PETMA
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 
 0.891
S4RC47_PETMA
Uncharacterized protein.
    
   0.880
TIMM21
Translocase of inner mitochondrial membrane 21.
     
 0.873
S4RLR2_PETMA
RNA polymerase I and III subunit C.
  
 
 0.868
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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