STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R4F5_PETMAUBX domain-containing protein. (128 aa)    
Predicted Functional Partners:
S4RMF7_PETMA
UBX domain protein 7.
    
 
0.995
S4RHJ9_PETMA
NSFL1 (p97) cofactor (p47).
    
 0.970
S4RQ99_PETMA
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.950
S4RQE2_PETMA
UBA domain-containing protein.
   
 0.949
S4RTM5_PETMA
UBX domain-containing protein.
   
 0.949
S4RLR5_PETMA
BTB (POZ) domain containing 9.
    
   0.923
S4R8Y2_PETMA
Uncharacterized protein.
   
 0.902
S4RJY1_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.902
S4RUF6_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.902
S4R717_PETMA
Uncharacterized protein.
 
      0.900
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.