Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R4H0_PETMAGPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. (235 aa)    
Predicted Functional Partners:
S4R9F7_PETMA
Phosphatidylinositol glycan anchor biosynthesis, class U.
    
 0.995
S4RUI8_PETMA
Uncharacterized protein.
   
 0.994
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.982
PGAP1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
    
 0.948
S4RV09_PETMA
Phosphatidylinositol glycan anchor biosynthesis, class F.
   
 
 0.944
S4RRY5_PETMA
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
 
     0.929
S4R4Q3_PETMA
Phosphatidylinositol glycan anchor biosynthesis, class N.
    
 
 0.688
S4RDL5_PETMA
Phosphatidylinositol glycan anchor biosynthesis, class O.
    
 
 0.679
S4RD80_PETMA
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.645
S4RSP5_PETMA
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
 
      0.637
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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