STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R4V2_PETMAUncharacterized protein. (368 aa)    
Predicted Functional Partners:
S4RAV7_PETMA
Uncharacterized protein.
 
     0.922
S4R5R7_PETMA
Arf-GAP domain-containing protein.
     
0.596
ADAP1
ArfGAP with dual PH domains 1.
     
0.596
S4R8S2_PETMA
Small ArfGAP 1.
     
0.596
S4RX08_PETMA
Uncharacterized protein.
     
0.596
S4RG03_PETMA
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 0.564
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
     
0.472
S4RDB8_PETMA
Uncharacterized protein.
    
  0.447
S4RFA1_PETMA
SH3 domain-containing protein.
    
  0.447
S4RG98_PETMA
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a.
    
  0.447
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.