STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R4V4_PETMAPHD-type domain-containing protein. (142 aa)    
Predicted Functional Partners:
S4RQW5_PETMA
MYST/Esa1-associated factor 6.
    
 0.982
S4RN62_PETMA
Actin-like 6A; Belongs to the actin family.
    
 0.969
S4RYX0_PETMA
Uncharacterized protein.
    
   0.949
S4RRA4_PETMA
Mortality factor 4 like 1.
   
 0.942
S4RQI3_PETMA
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.940
S4RM85_PETMA
ARID domain-containing protein.
   
 0.928
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
   
 0.928
S4RD05_PETMA
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.925
S4RST8_PETMA
Uncharacterized protein.
   
 0.925
EPC1
Enhancer of polycomb homolog.
   
 0.918
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.