STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R4Y9_PETMAUncharacterized protein. (404 aa)    
Predicted Functional Partners:
S4R5C4_PETMA
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.982
S4RZB2_PETMA
Ubiquitin carboxyl-terminal hydrolase.
    
 0.923
S4RUA6_PETMA
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.807
KDM1B
Lysine demethylase 1B.
    
 0.804
S4RRG7_PETMA
MBD domain-containing protein.
   
 0.746
S4RD46_PETMA
Uncharacterized protein.
    
 0.705
S4RD54_PETMA
Uncharacterized protein.
    
 0.705
S4RUN0_PETMA
Fork-head domain-containing protein.
    
 0.698
S4RV10_PETMA
Forkhead box K1.
    
 0.698
S4RGF3_PETMA
Arrestin, beta 2a.
    
 0.621
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.