STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R515_PETMAKv channel interacting protein 2. (215 aa)    
Predicted Functional Partners:
S4RA42_PETMA
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.802
S4RZM4_PETMA
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.802
S4RAB0_PETMA
Serine/threonine-protein phosphatase.
    
 0.772
S4R9J7_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.666
S4RQC7_PETMA
Xeroderma pigmentosum, complementation group C.
    
 0.636
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.621
S4RMK2_PETMA
Uncharacterized protein.
    
 
 0.581
S4RVX9_PETMA
WD repeat domain 90.
    
 
 0.581
S4RND2_PETMA
Calcium/calmodulin-dependent protein kinase II alpha.
    
 0.578
S4RU19_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.578
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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