STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R5Z1_PETMAUncharacterized protein. (149 aa)    
Predicted Functional Partners:
S4RZJ6_PETMA
CARD domain-containing protein.
    
 0.972
S4RBX5_PETMA
MALT paracaspase 2.
    
 0.956
S4RSA9_PETMA
G protein signaling modulator 1b.
    
 0.924
S4RHW3_PETMA
Uncharacterized protein.
   
 0.906
S4RHX2_PETMA
Uncharacterized protein.
   
 0.906
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
  
 0.831
S4RA80_PETMA
GMPS ATP-PPase domain-containing protein.
  
 
 0.823
S4R4K4_PETMA
Tight junction associated protein 1 (peripheral).
    
 0.820
S4RZP1_PETMA
Uncharacterized protein.
    
 0.812
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
    
  0.809
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.