STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R667_PETMAUncharacterized protein. (413 aa)    
Predicted Functional Partners:
S4RTC7_PETMA
Uncharacterized protein.
    
 0.826
S4RK02_PETMA
Uncharacterized protein.
    
 0.778
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.778
S4R5F3_PETMA
RunxI domain-containing protein.
    
 0.739
S4R8L8_PETMA
RHD domain-containing protein.
    
 0.725
S4REH5_PETMA
Uncharacterized protein; Belongs to the fatty acid desaturase type 1 family.
     
 0.723
S4RW13_PETMA
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.720
S4RKS5_PETMA
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.712
S4R661_PETMA
CAP-Gly domain-containing protein.
     
 0.710
S4RHC9_PETMA
3-oxoacyl-ACP synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.710
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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