STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R6Q5_PETMAUncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (223 aa)    
Predicted Functional Partners:
S4R6E7_PETMA
PBPe domain-containing protein.
  
 
 0.848
S4R9C4_PETMA
Uncharacterized protein.
    
 0.767
S4RBB0_PETMA
PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
 0.763
S4RND2_PETMA
Calcium/calmodulin-dependent protein kinase II alpha.
   
 0.760
S4RU19_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.760
S4RJZ9_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.759
S4R5Z1_PETMA
Uncharacterized protein.
    
 0.748
S4RH64_PETMA
Uncharacterized protein.
    
 0.748
GRIK1
Glutamate ionotropic receptor kainate type subunit 1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.742
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.696
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.