STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R725_PETMATransmembrane channel-like protein. (368 aa)    
Predicted Functional Partners:
S4R879_PETMA
Uncharacterized protein.
 
      0.896
S4RA91_PETMA
Calcium and integrin binding family member 2.
    
 0.810
S4RZM6_PETMA
Calcium and integrin binding family member 2.
    
 0.810
S4RUR4_PETMA
LHFPL tetraspan subfamily member 5b.
   
 0.738
S4RSA5_PETMA
Uncharacterized protein.
     
 0.709
VIT
Vitrin.
    
 0.679
ATP8A1
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.651
S4RE61_PETMA
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.633
S4RQ20_PETMA
Solute carrier family 52 member 3.
      
 0.614
S4RAH1_PETMA
Si:ch211-117c9.2.
   
 
 0.597
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.