Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R729_PETMAUncharacterized protein. (105 aa)    
Predicted Functional Partners:
S4RFZ0_PETMA
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
  
  
 
0.901
S4RGB3_PETMA
Component of oligomeric golgi complex 4.
    
  0.698
S4RM05_PETMA
Serine incorporator 1.
   
  
 0.628
S4RXT4_PETMA
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.616
S4RI37_PETMA
ALG5 dolichyl-phosphate beta-glucosyltransferase.
      
 0.584
S4R9Q8_PETMA
Uncharacterized protein.
      
 0.507
S4RFH3_PETMA
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.495
S4RM48_PETMA
Uncharacterized protein.
      
 0.459
S4RZW1_PETMA
Si:ch211-274f20.2.
      
 0.455
S4RXL3_PETMA
Fucosyltransferase 8a (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family.
   
  
 0.442
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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