STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R730_PETMAP-type domain-containing protein. (255 aa)    
Predicted Functional Partners:
S4RJX0_PETMA
NtCtMGAM_N domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
 
     
0.900
S4RUI2_PETMA
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
 
      0.899
S4RSI9_PETMA
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.860
S4RHD8_PETMA
Alpha-amylase.
  
 
 0.797
NUP54
Nucleoporin 54.
    
 0.788
ARHGAP11B
Rho GTPase activating protein 11B.
    
  0.753
S4RCD1_PETMA
Uncharacterized protein.
    
 0.750
S4R535_PETMA
PRKCSH-like domain-containing protein.
   
 0.746
S4RD18_PETMA
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.746
S4RG75_PETMA
EF-hand domain-containing protein.
   
 0.746
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.