STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R731_PETMANucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (630 aa)    
Predicted Functional Partners:
S4R7C7_PETMA
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.999
S4R7L5_PETMA
GN3L_Grn1 domain-containing protein.
   
 
 0.999
S4RGY9_PETMA
Brix domain containing 2.
   
 
 0.999
S4RQR4_PETMA
LTV1 ribosome biogenesis factor.
   
  
 0.999
S4RSV3_PETMA
Pescadillo.
   
 
 0.999
S4RXX4_PETMA
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.999
S4R6V5_PETMA
Proliferation-associated 2G4, b.
   
 
 0.998
S4RS71_PETMA
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.998
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.997
S4RR36_PETMA
Spb1_C domain-containing protein.
   
 
 0.997
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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