Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R732_PETMATransmembrane protein 184bb. (368 aa)    
Predicted Functional Partners:
S4RGH2_PETMA
GABA(A) receptor-associated protein like 2.
    
   0.872
S4R9I0_PETMA
Uncharacterized protein.
    
   0.699
S4RLH1_PETMA
Ig-like domain-containing protein.
    
   0.699
S4RQ64_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
   0.699
S4R7I5_PETMA
Ig-like domain-containing protein.
    
   0.661
S4R639_PETMA
RAB3A interacting protein (rabin3).
      
 0.640
S4RVL7_PETMA
Ribonuclease P/MRP 40 subunit.
    
 
 0.636
S4RGL8_PETMA
Transmembrane protein 214.
      
 0.629
S4RYA5_PETMA
ADAMTS like 5.
      
 0.622
S4RF54_PETMA
NFACT-R_1 domain-containing protein.
      
 0.617
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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