Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R734_PETMA3'-5' exonuclease domain-containing protein. (209 aa)    
Predicted Functional Partners:
S4R5H9_PETMA
Uncharacterized protein.
    
 
 0.943
S4RR63_PETMA
Bicaudal D homolog 2 (Drosophila).
    
 
 0.943
S4RA44_PETMA
Peptidylprolyl isomerase.
   
  
 0.700
S4R4N9_PETMA
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.693
S4RBY2_PETMA
Phosphoglycerate kinase.
      
 0.676
S4RNI3_PETMA
3'-5' exonuclease domain-containing protein.
      
 0.668
S4RXB2_PETMA
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.668
S4RKA7_PETMA
Acyl-CoA synthetase long chain family member 3b.
      
 0.663
S4RFT3_PETMA
HEN methyltransferase 1.
      
 0.657
S4R9H9_PETMA
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
  
 0.649
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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