Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R738_PETMAUncharacterized protein. (132 aa)    
Predicted Functional Partners:
S4RQU6_PETMA
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
    
 0.642
S4RQ83_PETMA
Tonsoku-like, DNA repair protein.
    
 0.621
S4RHN5_PETMA
Sulfite oxidase; Belongs to the cytochrome b5 family.
    
 
 0.570
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.528
S4R514_PETMA
NADPH oxidase, EF-hand calcium binding domain 5.
    
 0.526
S4RBZ7_PETMA
Dual oxidase.
    
 0.526
S4RC11_PETMA
Dual oxidase.
    
 0.526
S4RC19_PETMA
Dual oxidase.
    
 0.526
S4RMK2_PETMA
Uncharacterized protein.
    
   0.526
S4RVX9_PETMA
WD repeat domain 90.
    
   0.526
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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