Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R739_PETMAPoly [ADP-ribose] polymerase. (325 aa)    
Predicted Functional Partners:
S4RNP7_PETMA
Uncharacterized protein.
    
   0.888
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
   
 0.775
WDR24
WD repeat domain 24.
    
 0.738
S4RXA3_PETMA
Uncharacterized protein.
      
 0.720
S4REX3_PETMA
RING-type domain-containing protein.
    
 
 0.687
S4RDB5_PETMA
WGR domain-containing protein.
      
 0.681
S4RIT1_PETMA
WD repeat domain 59.
    
 0.648
WDR59
WD repeat domain 59.
    
 0.648
S4RG32_PETMA
Poly [ADP-ribose] polymerase.
      
 0.637
S4RVA0_PETMA
Poly [ADP-ribose] polymerase.
      
 0.637
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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