Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R747_PETMAMgtE domain-containing protein. (112 aa)    
Predicted Functional Partners:
S4R6N7_PETMA
Magnesium transporter.
      
 0.663
S4RST5_PETMA
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
      
 0.622
S4R483_PETMA
Uncharacterized protein.
      
 0.611
S4RG76_PETMA
Coiled-coil-helix-coiled-coil-helix domain containing 4b.
      
 0.609
S4RSY9_PETMA
Cyclin and CBS domain divalent metal cation transport mediator 4b.
      
 0.606
S4RDZ9_PETMA
Amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein.
      
 0.597
S4RV15_PETMA
Peptidase M20 domain containing 1, tandem duplicate 1.
      
 0.595
S4RTF6_PETMA
Solute carrier family 35 member C2.
      
 0.545
S4RKV0_PETMA
Solute carrier family 35 member B1.
   
  
 0.482
S4RQ20_PETMA
Solute carrier family 52 member 3.
      
 0.463
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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