STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R754_PETMAWD_REPEATS_REGION domain-containing protein. (333 aa)    
Predicted Functional Partners:
S4RM18_PETMA
Uncharacterized protein.
 
      0.900
S4RVX6_PETMA
Damage-specific DNA binding protein 1.
    
 
 0.887
S4RMF7_PETMA
UBX domain protein 7.
   
 0.840
S4RNZ6_PETMA
Cullin 4B; Belongs to the cullin family.
   
 
 0.776
S4R848_PETMA
Uncharacterized protein.
   
 0.774
KIF27
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.773
S4RHX2_PETMA
Uncharacterized protein.
   
  0.724
S4RI70_PETMA
Uncharacterized protein.
    
 0.701
S4RZC9_PETMA
PKS_ER domain-containing protein.
    
 
 0.654
S4RBA8_PETMA
TBC1 domain family, member 7.
      
 0.652
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.