STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R759_PETMAGATA zinc finger domain containing 2B. (484 aa)    
Predicted Functional Partners:
S4RIY0_PETMA
CHDNT domain-containing protein.
   
 0.982
S4RM85_PETMA
ARID domain-containing protein.
    
 0.982
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
    
 0.982
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 0.957
PHF21A
PHD finger protein 21A.
    
 0.892
S4RRY4_PETMA
PHD-type domain-containing protein.
    
 0.880
S4RGI4_PETMA
Uncharacterized protein.
   
 0.874
S4RI53_PETMA
Metastasis associated 1 family, member 3.
   
 0.874
S4R5I2_PETMA
MBD domain-containing protein.
    
 0.873
S4RBV4_PETMA
Methyl-CpG binding domain protein 2.
    
 0.873
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.