Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R759_PETMAGATA zinc finger domain containing 2B. (484 aa)    
Predicted Functional Partners:
S4RIY0_PETMA
CHDNT domain-containing protein.
   
 0.995
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
   
 0.993
S4RI53_PETMA
Metastasis associated 1 family, member 3.
   
 0.971
S4R621_PETMA
Uncharacterized protein.
   
 
 0.951
S4RGI4_PETMA
Uncharacterized protein.
   
 0.941
S4RFR6_PETMA
Uncharacterized protein.
   
 
 0.929
S4RXT2_PETMA
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.929
S4R5I2_PETMA
MBD domain-containing protein.
   
 0.913
S4RBV4_PETMA
Methyl-CpG binding domain protein 2.
   
 0.913
PHF21A
PHD finger protein 21A.
    
 0.884
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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