Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
S4R768_PETMACCM2_C domain-containing protein. (446 aa)    
Predicted Functional Partners:
S4RQG6_PETMA
KRIT1 ankyrin repeat containing.
    
 0.999
S4R8P6_PETMA
Programmed cell death 10a.
    
 0.998
S4RQJ4_PETMA
Integrin beta 1 binding protein 1.
    
 
 0.993
S4RK87_PETMA
E3 ubiquitin-protein ligase.
    
 0.974
S4R6H7_PETMA
Mitogen-activated protein kinase kinase kinase 2.
    
 0.963
CTNNB1
Catenin beta 1.
    
 0.916
CTNNB1-2
Catenin beta 1.
    
 0.916
CTNNB1-3
Catenin beta 1.
    
 0.916
CTNNB1-4
Catenin beta 1.
    
 0.916
EFCAB2
EF-hand domain-containing protein.
    
 
 0.814
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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