Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R769_PETMARRM domain-containing protein. (408 aa)    
Predicted Functional Partners:
S4R9D2_PETMA
Uncharacterized protein.
   
 0.999
S4R8C8_PETMA
Splicing factor 3b, subunit 1.
   
 0.997
S4R7J6_PETMA
Splicing factor 3a, subunit 3.
   
 0.995
S4RRN5_PETMA
Splicing factor 3a, subunit 1.
   
 0.995
S4RFX9_PETMA
Small nuclear ribonucleoprotein polypeptide A.
   
 0.994
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.991
S4RTT9_PETMA
Splicing factor 3b, subunit 4.
    
 0.990
S4RU67_PETMA
G patch domain containing 11.
   
 
 0.982
S4RV90_PETMA
Splicing factor 1.
   
 0.979
S4RTD2_PETMA
Survival motor neuron domain containing 1.
   
  0.975
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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