STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R779_PETMAGlycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (737 aa)    
Predicted Functional Partners:
GK2
Glycerol kinase 2; Belongs to the FGGY kinase family.
 0.989
S4RM59_PETMA
FGGY carbohydrate kinase domain containing.
  
 0.956
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.952
S4REH8_PETMA
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 0.941
S4RW01_PETMA
Glycerol-3-phosphate dehydrogenase [NAD(+)].
   
 0.941
S4RW81_PETMA
Xylulokinase homolog (H. influenzae).
  
 
 0.941
S4R7Q9_PETMA
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.940
S4RMC5_PETMA
ATPase family AAA domain containing 2B.
  
 0.940
S4RNK7_PETMA
Proteasome 26S subunit, ATPase 1a.
  
 0.940
S4RS79_PETMA
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
  
 0.940
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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