Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R782_PETMACBFD_NFYB_HMF domain-containing protein. (113 aa)    
Predicted Functional Partners:
S4R9U8_PETMA
MAP3K12 binding inhibitory protein 1.
    
 0.916
S4R5A1_PETMA
Transcriptional adapter.
    
 0.912
S4RUP0_PETMA
Uncharacterized protein.
    
 0.912
S4REE3_PETMA
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.910
S4RMF9_PETMA
DR1-associated protein 1 (negative cofactor 2 alpha).
   
 
 0.903
S4RD22_PETMA
Lysine acetyltransferase 14.
    
 0.846
S4R5S2_PETMA
Zinc finger, ZZ-type containing 3.
    
 0.832
S4R481_PETMA
K(lysine) acetyltransferase 2B.
    
 0.824
S4RP24_PETMA
WD repeat and SOCS box containing 1.
   
  0.792
S4RMW7_PETMA
Uncharacterized protein.
    
 0.760
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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