Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R788_PETMATestis expressed 10. (656 aa)    
Predicted Functional Partners:
S4RY41_PETMA
Uncharacterized protein.
   
 0.999
S4RSV3_PETMA
Pescadillo.
   
 0.992
S4R7C7_PETMA
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.984
S4R7L5_PETMA
GN3L_Grn1 domain-containing protein.
   
 0.974
S4RQ72_PETMA
Ribosomal_L7Ae domain-containing protein.
    
  0.972
S4RAX7_PETMA
Ribosomal protein L34.
    
  0.971
S4RWR0_PETMA
Ribosomal protein L8.
   
  0.971
S4RZ42_PETMA
Ribosomal protein L21.
   
  0.971
S4RGL0_PETMA
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
  0.970
S4RNI5_PETMA
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
  0.970
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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