Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R797_PETMAUncharacterized protein. (136 aa)    
Predicted Functional Partners:
S4REL5_PETMA
Uncharacterized protein.
   
 0.979
S4RWF4_PETMA
Uncharacterized protein.
    
 0.968
S4RPS8_PETMA
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.948
S4RIP9_PETMA
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.943
S4RIK7_PETMA
Heat shock protein 70 family, member 13.
     
 0.932
S4RSL0_PETMA
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
   
 
 0.893
S4R4G1_PETMA
DH domain-containing protein.
   
 
 0.891
S4R7V9_PETMA
Dynamin binding protein.
   
 
 0.891
S4S027_PETMA
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.886
S4RQV2_PETMA
Uncharacterized protein.
    
 
 0.851
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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