Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7A0_PETMAPAS domain-containing protein. (992 aa)    
Predicted Functional Partners:
S4RL68_PETMA
Uncharacterized protein.
   
 0.957
S4RVI9_PETMA
Prostaglandin E synthase 3b (cytosolic).
    
 0.844
S4R4N4_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.795
S4RDV2_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.795
S4RYL2_PETMA
Cytochrome P450, family 1, subfamily D, polypeptide 1; Belongs to the cytochrome P450 family.
    
 0.652
S4RTM6_PETMA
Si:ch211-131k2.3.
    
 0.599
S4RC77_PETMA
Uncharacterized protein.
   
 0.586
S4RCM1_PETMA
Uncharacterized protein.
   
 0.586
S4RH78_PETMA
BHLH domain-containing protein.
   
 0.586
S4RM69_PETMA
NR LBD domain-containing protein.
    
 
 0.586
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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