Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7A9_PETMAInhibitor of DNA binding 4. (105 aa)    
Predicted Functional Partners:
S4R783_PETMA
BHLH domain-containing protein.
    
 
 0.882
S4R7B0_PETMA
Uncharacterized protein.
    
 
 0.882
ASCL4
Achaete-scute family bHLH transcription factor 4.
    
 0.837
S4RB77_PETMA
BHLH domain-containing protein.
    
 0.684
S4RGR4_PETMA
Uncharacterized protein.
      
 0.673
S4RQD6_PETMA
GATA binding protein 3.
    
 0.669
GDF11
Growth differentiation factor 11.
      
 0.618
S4RKT8_PETMA
Protein kinase domain-containing protein.
      
 0.577
S4RNQ2_PETMA
Link domain-containing protein.
      
 0.562
S4RDV0_PETMA
Uncharacterized protein.
    
 0.537
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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