Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7B0_PETMAUncharacterized protein. (159 aa)    
Predicted Functional Partners:
S4RB77_PETMA
BHLH domain-containing protein.
    
 0.942
ASCL4
Achaete-scute family bHLH transcription factor 4.
    
 0.903
S4R783_PETMA
BHLH domain-containing protein.
 
      0.900
S4R5E1_PETMA
Transcription factor 21.
    
 0.893
S4R7A9_PETMA
Inhibitor of DNA binding 4.
    
 
 0.882
S4RJD3_PETMA
E1A binding protein p300 a.
   
 0.877
S4RSW9_PETMA
Neuronal differentiation 1.
    
 
 0.875
TWIST1-2
Twist family bHLH transcription factor 1.
    
 
 0.827
CTNNB1
Catenin beta 1.
    
 0.698
CTNNB1-2
Catenin beta 1.
    
 0.698
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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