Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A4Anion exchange protein. (497 aa)    
Predicted Functional Partners:
S4RGQ5_PETMA
Band_3_cyto domain-containing protein.
 
      0.900
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.696
S4RFG6_PETMA
ANK_REP_REGION domain-containing protein.
     
 0.618
S4RCH0_PETMA
KAT8 regulatory NSL complex subunit 3.
      
 0.483
S4RL19_PETMA
Carbonic anhydrase IV b; Belongs to the alpha-carbonic anhydrase family.
   
 
 0.470
NPFFR1
Neuropeptide FF receptor 1 like 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.459
S4RMD8_PETMA
G protein-coupled receptor 135; Belongs to the G-protein coupled receptor 1 family.
      
 0.459
S4RR78_PETMA
Solute carrier family 12 member 4.
    
 
 0.451
S4RA42_PETMA
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.450
S4RNT9_PETMA
AdoHcyase_NAD domain-containing protein.
    
 
 0.438
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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