Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R7B9_PETMASerum amyloid A-like 1. (224 aa)    
Predicted Functional Partners:
S4RZ41_PETMA
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
 
    
 0.684
S4RFH2_PETMA
Catechol-O-methyltransferase domain containing 1.
    
 
 0.638
TMEM19
Transmembrane protein 19.
      
 0.631
S4RDR6_PETMA
Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.
      
 0.499
S4RN38_PETMA
Ubiquitin-like modifier activating enzyme 3.
      
 0.439
S4RUU0_PETMA
Nitric oxide synthase-interacting protein; Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity; Belongs to the NOSIP family.
      
 0.429
S4R9F4_PETMA
Switching B cell complex subunit SWAP70b.
      
 0.407
DEF6
DEF6 guanine nucleotide exchange factor a.
      
 0.407
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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