Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
S4R7C2_PETMAUncharacterized protein. (553 aa)    
Predicted Functional Partners:
S4RKI6_PETMA
Intraflagellar transport 88 homolog.
  
 0.998
S4R8I3_PETMA
Clusterin associated protein 1.
  
 
 0.997
S4RAS9_PETMA
Intraflagellar transport 52 homolog (Chlamydomonas).
   
 0.997
S4RWD7_PETMA
Uncharacterized protein.
   
 0.997
S4R677_PETMA
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.996
S4RIE6_PETMA
MIP-T3 domain-containing protein.
    
 0.994
S4RZP3_PETMA
RING-type domain-containing protein.
   
 0.994
S4R4Q5_PETMA
Fleer.
   
 0.993
S4RB39_PETMA
Intraflagellar transport 74.
   
 0.992
IFT74
Intraflagellar transport 74.
   
 0.984
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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