Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R7C4_PETMARNA pseudouridine synthase domain containing 2. (407 aa)    
Predicted Functional Partners:
S4RNV6_PETMA
Pseudouridine synthase 7 like.
    
 
 0.809
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.694
S4R726_PETMA
GTP binding protein 3, mitochondrial.
  
 
 0.688
S4RS94_PETMA
FGFR1 oncogene partner 2.
    
   0.678
S4R7I2_PETMA
Cerebellar degeneration-related protein 2a.
    
   0.673
S4RMZ2_PETMA
Si:zfos-1192g2.3.
  
 
 0.670
S4RBS3_PETMA
Mitochondrial ribosomal protein L15.
  
 
 0.659
S4REV2_PETMA
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.655
S4R9F6_PETMA
Uncharacterized protein.
      
 0.653
S4RIQ6_PETMA
Pseudouridine synthase 1.
  
  
 0.652
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.