Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFE3Transcription factor binding to IGHM enhancer 3. (348 aa)    
Predicted Functional Partners:
S4RY86_PETMA
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.810
S4R8I1_PETMA
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.698
S4RBN6_PETMA
Protein kinase domain-containing protein.
   
 0.694
S4RQ59_PETMA
Protein kinase domain-containing protein.
   
 0.694
S4RN92_PETMA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.640
S4RQ19_PETMA
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.640
S4RRF7_PETMA
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
     
 0.636
S4RMW1_PETMA
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family.
    
 0.629
S4RJD3_PETMA
E1A binding protein p300 a.
    
 0.621
S4RVJ0_PETMA
Lysine--tRNA ligase.
     
 0.606
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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