STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7E3_PETMAGlycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family. (460 aa)    
Predicted Functional Partners:
S4RHN5_PETMA
Sulfite oxidase; Belongs to the cytochrome b5 family.
      
 0.662
S4RGS6_PETMA
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
 
 0.642
S4R800_PETMA
Tr-type G domain-containing protein.
   
  
 0.629
S4RJX2_PETMA
Threonyl-tRNA synthetase.
      
 0.616
S4RGJ4_PETMA
WD_REPEATS_REGION domain-containing protein.
 
 
  
 0.610
S4RHI5_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
     
 0.604
S4RPV7_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
     
 0.604
S4RIT0_PETMA
Vezatin domain-containing protein.
   
 
 0.552
S4RA80_PETMA
GMPS ATP-PPase domain-containing protein.
 
 
    0.538
S4R8C8_PETMA
Splicing factor 3b, subunit 1.
 
 
    0.532
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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