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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7E4_PETMAPotassium voltage-gated channel 7b; Belongs to the potassium channel family. (260 aa)    
Predicted Functional Partners:
S4RCX1_PETMA
KCNQ_channel domain-containing protein.
 
      0.900
S4RWY7_PETMA
Potassium voltage-gated channel 7c.
 
      0.853
S4RTT8_PETMA
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
  
0.824
S4RR28_PETMA
Ribosomal protein L31.
   
 0.818
S4RQ72_PETMA
Ribosomal_L7Ae domain-containing protein.
   
 0.811
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.798
S4RBM2_PETMA
Ribosomal protein L35a.
   
 0.797
S4S0Q2_PETMA
Ribosomal protein L24.
   
 0.796
RPL32
Ribosomal protein L32.
  
 0.795
S4RNM4_PETMA
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.795
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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