STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R7F2_PETMACarnitine O-octanoyltransferase; Belongs to the carnitine/choline acetyltransferase family. (356 aa)    
Predicted Functional Partners:
S4RK56_PETMA
Carnitine O-octanoyltransferase.
 
     0.950
S4RZ14_PETMA
Carn_acyltransf domain-containing protein.
 
  
  0.942
S4RJT8_PETMA
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
 
   
 0.933
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
     
 0.622
S4RLX5_PETMA
Peroxisomal biogenesis factor 13.
     
 0.611
S4RM99_PETMA
Trypsin domain containing 1.
     
 0.516
S4R965_PETMA
Hydroxysteroid (17-beta) dehydrogenase 4.
   
 
 0.513
S4RLW0_PETMA
Peroxisomal biogenesis factor 2.
     
 0.512
S4R7R6_PETMA
Uncharacterized protein.
   
 
 0.499
S4RLH8_PETMA
SCP2 domain-containing protein.
   
 
 0.499
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.